Cheminformatics (La Jolla)

Overview

The Cheminformatics core supports assay development, high throughput (HTS), ultra-high throughput (uHTS), and high-content screening (HCS) activities performed at the Conrad Prebys Center for Chemical Genomics by providing databases and tools for compound registration and inventory, HTS plate formatting and tracking, HTS and HCS bioassay data processing as well as related data and information handling. Data mining and reporting are also facilitated with a user-friendly database interface. The Cheminformatics core also supports the design and obtaining of appropriate compound collections, as well as SAR follow-up of hits, hit-to-lead optimization and in silico screening through docking and other molecular modeling approaches.
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Services

  • HTS data handling, processing and reporting
  • Apply virtual screening to drug discovery projects
  • Support drug discovery project with SAR analysis and SAR development using cheminformatics approaches.
  • Assist combinatorial library design and library enumeration.
  • Use computer-aided design approaches to aid in design of novel drug molecule candidates
  • Help identify potential commercial sources of the compounds of your interest and their analogs

Equipment and Resources

  • ChemInnovation’s Chemical and Biological Information System (CBIS)
  • Genedata Assay Analyser and Condoseo
  • Accelrys’s Pipeline Pilot and Discovery Studio
  • Schrodinger’s Glide, Prime, Ligprep and MacroModel
  • 32-CPU cluster for virtual screening using GOLD
  • Schrodinger's Seurat

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